PRESENT IN ALL META

single copy in HMAGN and NVECT

Ortho_118.fa

Using Galaxy to get just protein from those two taxa

OrthoDB_H_N.fasta

BLASTING

./tblastn -query /Volumes/Bay3/Software/ncbi-blast-2.2.26+/query/OrthoDB_H_N.fasta -db /Volumes/Bay3/Software/ncbi-blast-2.2.26+/db/SeaFan_Consensus90230 -outfmt 6 -out /Volumes/Bay3/Software/ncbi-blast-2.2.26+/out/OrthoDB_H_N_SeaFan_blastnout_5hits -max_target_seqs 5 -num_threads 3

OrthoDB_H_N_SeaFan_blastnout_5hits(updated Sept 17 2013)

./tblastn -query /Volumes/Bay3/Software/ncbi-blast-2.2.26+/query/OrthoDB_H_N.fasta -db /Volumes/Bay3/Software/ncbi-blast-2.2.26+/db/SeaFan_Consensus90230 -outfmt 6 -out /Volumes/Bay3/Software/ncbi-blast-2.2.26+/out/OrthoDB_H_N_SeaFan_blastnout -max_target_seqs 1 -num_threads 3

OrthoDB_H_N_SeaFan_blastnout

OrthoDB_H_N_SeaFan_blastnout.xls

Hydra 112 <1E

NVECT